Individuals
Class GEChromosome

java.lang.Object
  Util.Structures.StaticIntList
      Individuals.GEChromosome

All Implemented Interfaces:

Chromosome, IntList

public class GEChromosome
extends StaticIntList
implements Chromosome

Fixed length linear integer chromosome. This class is built on the static int list class from the the util package. A fast static list structure with dynamic size.

Field Summary

Fields inherited from class Util.Structures.StaticIntList

currentSize, data, initialSize, maxSize

Constructor Summary

GEChromosome()

GEChromosome(GEChromosome c)
Copy constructor

GEChromosome(int size)

GEChromosome(int size, int[] data)

Method Summary

void	doubleSize() Double the size of the data ????
int	getCodonSize()
int	getCodonSizeBits()
static int	getDefaultLength() get the default length
int	getLength() Returns the length of the genotype.
int	getMaxChromosomeLength()
int	getMaxCodonValue() Maximum value of a codon
int	getUsedGenes() Get how many genes where used when mapping
int	getUsedWraps() Get how many wraps were used
boolean	getValid() Returns the current valid field.
static void	setDefaultLength(int length) Set the default length
void	setMaxChromosomeLength(int maxChromosomeLength)
void	setMaxCodonValue(int maxCodonValue) Set maximum codon value.
void	setUsedGenes(int usedGenes) Set how many genes where used during mapping
void	setUsedWraps(int usedWraps) Set how many wraps that where used
void	setValid(boolean newValid) Set a new value for the valid field.
java.lang.String	toString()

Methods inherited from class Util.Structures.StaticIntList

add, allocationSize, clear, get, getMaxSize, iterator, main, set, setAll, setMaxSize, size, toArray

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

GEChromosome

public GEChromosome()

GEChromosome

public GEChromosome(int size)

GEChromosome

public GEChromosome(int size,
                    int[] data)

GEChromosome

public GEChromosome(GEChromosome c)

Copy constructor

Parameters:

c - copy

Method Detail

getCodonSizeBits

public int getCodonSizeBits()

getMaxChromosomeLength

public int getMaxChromosomeLength()

setMaxChromosomeLength

public void setMaxChromosomeLength(int maxChromosomeLength)

setUsedWraps

public void setUsedWraps(int usedWraps)

Set how many wraps that where used

Parameters:

usedWraps - number of wraps used

getUsedWraps

public int getUsedWraps()

Get how many wraps were used

Returns:

number of wraps used

getUsedGenes

public int getUsedGenes()

Get how many genes where used when mapping

Returns:

number of genes used

setUsedGenes

public void setUsedGenes(int usedGenes)

Set how many genes where used during mapping

Parameters:

usedGenes - number of genes used

getMaxCodonValue

public int getMaxCodonValue()

Maximum value of a codon

Returns:

codon max value

getCodonSize

public int getCodonSize()

setMaxCodonValue

public void setMaxCodonValue(int maxCodonValue)

Set maximum codon value. Small values can bias the choices of production rules when applying mod to the codon value.

Parameters:

maxCodonValue - maximum codon value allowed

getLength

public int getLength()

Returns the length of the genotype.

Specified by:

getLength in interface Chromosome

Returns:

length

getValid

public boolean getValid()

Returns the current valid field.

Returns:

validity of the genotype

setValid

public void setValid(boolean newValid)

Set a new value for the valid field.

Parameters:

newValid - value for genotype validity

doubleSize

public void doubleSize()

Double the size of the data ???? This is already a feature of the staticIntList class.

setDefaultLength

public static void setDefaultLength(int length)

Set the default length

Parameters:

length - default length

getDefaultLength

public static int getDefaultLength()

get the default length

Returns:

default length

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object